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How to Automatically Retrieve Results / Postprocess When Job is Done
Ever wish you could set up a script to automatically retrieve and / or process results as soon as your job is finished? Read on to learn more. Installing the Script OIT staff have developed a shell script to simplify this task. It works by periodically check...
How to Troubleshoot a Failed Easybuild Compilation
Problem If you've been using Easybuild for self-service software, you may have encountered trouble with one of your builds, such as the one pictured below. When Easybuild doesn't build easily, what do you do? Keep reading for some tips and suggestions! Ste...
Using the Intel Compilers on ACRES
1 2Overview 3Loading an Intel Module 4Choosing the Right Compiler Executables 5Using Intel MPI: Divide by Zero or Floating Point Exception Error 6Intel MPI Library Developer Reference for Linux 7Related Articles Overview This page documents the s...
Going Deeper into EasyBuild: EasyBlocks
Overview When easyconfig (*.eb file) modifications are not sufficient to install a new software or new software version using EasyBuild, one may need to modify the underlying EasyBlock code. This page describes some of the details of that process. What is an...
How to Use Graphical Applications on ACRES
Following this method, you may run a graphical application on ACRES and see / interact with it through the display of your local computer. RUNNING PARALLEL JOBS Please note: DO NOT use the method outlined in the article to execute parallel jobs. Intensive pa...
Using ACRES: The Basics of a Linux Command Line
If it's your first time logging in to ACRES, you may be left staring at a flashing green cursor in a black terminal, without the slightest idea of what to do next. If that's you, you've come to the right place. Read on, and you'll be up and running in no ...
How To Login To Acres
This page describes how to log in to the ACRES computing cluster. If you do not yet have an account on ACRES, please request one by emailing the OIT helpdesk: helpdesk@clarkson.edu Login to Clarkson VPN If you are not connected to Clarkson's Network (e.g. yo...
ACRES - Software - cp2k
ACRES includes cp2k 7.1.0 For parallel processing you will want to use the cp2k.popt executable. Sample SBATCH file for scheduling via SLURM: #!/bin/bash #SBATCH --account=user #SBATCH --job-name=cp2k #SBATCH --output=cp2k.txt #SBATCH --nodes=9 #SBAT...
High Performance Computing (HPC)
Clarkson University hosts several HPC environments. Most are small-scale and supported by individual researchers and research groups. One, ACRES, is centrally supported by the Office of Information Technology. General information about the genesis of ACRES,...
ACRES - Software - Altair SimLab
1Overview and Scope 2Exporting A Solver Input File 4Choosing the Appropriate Solver 5Adjusting the SLURM Submit Script 6Submitting the Job 7Retrieving the Results 8Errors and Solutions 9Related articles Overview and ...